For a full list of my publications, please see my Google Scholar and DBLP.

Selected Publications

2020

  1. Xuan Wang, Xiangchen Song, Bangzheng Li, Yingjun Guan and Jiawei Han, “Comprehensive Named Entity Recognition on CORD-19 with Distant or Weak Supervision”, 2020 Intelligent Systems for Molecular Biology (ISMB’20), Abstracts (oral and poster), July 2020, online.
  2. Xuan Wang, Weili Liu, Aabhas Chauhan, Yingjun Guan and Jiawei Han, “Automatic Textual Evidence Mining in COVID-19 Literature”, 2020 Intelligent Systems for Molecular Biology (ISMB’20), Abstracts (poster), July 2020, online.
  3. Yu Zhang, Yu Meng, Jiaxin Huang, Frank F. Xu, Xuan Wang and Jiawei Han, “Minimally Supervised Categorization of Text with Metadata”, in Proc. 2020 ACM SIGIR Int. Conf. on Research and development in Information Retrieval (SIGIR’20), Xi’an, China, July 2020
  4. Xuan Wang, Yingjun Guan, Weili Liu, Aabhas Chauhan, Enyi Jiang, Qi Li, David Liem, Dibakar Sigdel, John Caufield, Peipei Ping and Jiawei Han, “EVIDENCEMINER: Textual Evidence Discovery for Life Sciences”, in Proc. 2020 Annual Conf. of the Association for Computational Linguistics (ACL’20) (System demo), Seattle, WA, July 2020

2019

  1. Xuan Wang*, Yu Zhang*, Qi Li, Xiang Ren, Jingbo Shang, and Jiawei Han, “Distantly Supervised Biomedical Named Entity Recognition with Dictionary Expansion”, in Proc. 2019 IEEE Int. Conf. on Bioinformatics and Biomedicine (IEEE-BIBM’19), San Diego, CA, Nov. 2019
  2. Yu Zhang, Frank F. Xu, Sha Li, Yu Meng, Xuan Wang, Qi Li, and Jiawei Han, “HiGitClass: Keyword-Driven Hierarchical Classification of GitHub Repositories”, in Proc. 2019 Int. Conf. on Data Mining (ICDM’19), Beijing, November 2019
  3. Xuan Wang, Qi Li, Jiaxin Huang, Yu Zhang, Charles Blatti, Mikel Hernaez and Jiawei Han, “ClaimMiner: Query-guided Claim Mining in Biomedical Literature”, 2019 Intelligent Systems for Molecular Biology (ISMB’19), Abstracts (oral and poster).
  4. Yu Zhang, Xiang Ren, Xuan Wang, Qi Li and Jiawei Han. “Organizing Bioinformatics GitHub Repositories with Multidimensional Text Cube”, 2019 Intelligent Systems for Molec- ular Biology (ISMB’19), Abstracts (poster).
  5. Jiawei Han, Qi Li, Jiaming Shen, Xuan Wang, Jinfeng Xiao and Yu Zhang. “Text Mining for Biomedical Literature-Based Discovery”, 2019 Intelligent Systems for Molecular Biology (ISMB’19), Abstracts (poster).

2018

  1. Xuan Wang, Yu Zhang, Xiang Ren, Yuhao Zhang, Marinka Zitnik, Jingbo Shang, Curtis Langlotz and Jiawei Han, “Cross-type Biomedical Named Entity Recognition with Deep Multi-Task Learning”, Bioinformatics 35.10 (2018): 1745-1752. [code]
  2. Xuan Wang*, Yu Zhang*, Qi Li, Cathy H. Wu and Jiawei Han, “PENNER: Pattern-enhanced Nested Named Entity Recognition in Biomedical Literature”, in Proc. 2018 Int. Conf. on Bioinformatics and Biomedicine (IEEE-BIBM’18), Madrid, Spain, Dec. 2018
  3. Qi Li, Xuan Wang, Yu Zhang, Fei Ling, Cathy H. Wu and Jiawei Han, “Pattern Discovery for Wide-Window Open Information Extraction in Biomedical Literature”, in Proc. 2018 Int. Conf. on Bioinformatics and Biomedicine (IEEE-BIBM’18), Madrid, Spain, Dec. 2018
  4. Xuan Wang, Yu Zhang, Qi Li, Yinyin Chen, and Jiawei Han. “Open Information Extraction with Meta-pattern Discovery in Biomedical Literature”, in Proc. of 2018 ACM Conf. on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB’18), Washington, DC, August 2018
  5. Jingbo Shang, Qi Zhu, Jiaming Shen, Xuan Wang, Xiaotao Gu, Lance Kaplan, Timothy Harratty, and Jiawei Han, “AutoNet: Automated Network Construction and Exploration System from Domain-Specific Corpora”, in Proc. of 2018 ACM SIGKDD Int. Conf. on Knowledge Discovery and Data Mining (KDD’18), (demo paper), London, UK, August 2018
  6. David Liem, Alexandre, Sanjana Murali, Dibakar Sigdel, Yu Shi, Xuan Wang, Jiaming Shen, Howard Choi et al. “Phrase Mining of Textual Data to Analyze Extracellular Matrix Protein Patterns Across Cardiovascular Disease”, American Journal of Physiology-Heart and Circulatory Physiology, 1;315(4):H910-H924, 2018

2017

  1. Xiang Ren, Jiaming Shen, Meng Qu, Xuan Wang, Zeqiu Wu, Qi Zhu, Meng Jiang et al. “Life-iNet: A Structured Network-Based Knowledge Exploration and Analytics System for Life Sciences”, in Proc. of 2017 Annual Meeting of the Association for Computational Linguistics (ACL’17), (system demo), Vancouver, Canada, July 2017

Conference Tutorials

  1. Xuan Wang, Yu Zhang, Qi Li, Jiawei Han, “Taming Unstructured Big Data: Automated Information Extraction from Massive Text” (Conference tutorial), 2019 IEEE Int. Conf. on Big Data (IEEE BigData’19), Los Angeles, CA, Dec. 2019